Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809906.1_cds_XP_016495987.1_10254
CDS Infomation

[gene=LOC107814996] [db_xref=GeneID:107814996] [protein=1-aminocyclopropane-1-carboxylate synthase-like] [protein_id=XP_016495987.1] [location=complement(join(80496..81501,82252..82412,82514..82645,82788..82958))] [gbkey=CDS]
Sequence

ATGGGATTTGAGAATGAGAAGAACAACTCAATCTTGTCTAAGCTCGCTACTAATGAAGAA
CATGGCGAAAACTCGCCATATTTCGATGGATGGAAAGCATACGATAACGATCCTTTTCAC
CCTTTGAAGAACCCTAATGGTGTTATCCAAATGGGTCTTGCAGAAAATCAGCTTTGTTTT
GACTTGATTAAGGAATGGATTAAGAGAAACCCAAACGCTTCAATTTGCACTACTGAAGGA
ATCAAGTCTTTCAGGGCCATTGCCAACTTCCAAGATTATCACGGCCTACCTGAATTCAGA
AGAGCTATTGCGAAATTTATGGAAAAAACAAGAGGGGGAAGGGTTACGTTTGATCCTGAG
AGAGTAGTTATGGCTGGTGGTGCAACTGGAGCCAACGAAACAATTATATTTTGTTTGGCT
GATGCAGGAGATGCATTCTTAGTACCTTCACCATATTACCCAGCATTTAACCGGGACTTA
AGATGGAGAACTGGAGTACAACTCATTCCAATTCCTTGCGACAGCTCCAACAATTTCCAA
ATCACTACAAAAGCTGTGAAAGAAGCATATGAAAATGCCCAGAAATCAAACATCAAAGTC
AAAGGCTTGATTTTGACCAACCCATCAAATCCATTAGGCACCACTTTGGACAGAGACACA
TTGAAAAGTCTCTTGACCTTCACCAACCAACATAACATCCACCTCGTTTGCGACGAAATT
TACGCCGCAACTGTCTTCAGTACACCTCAATTCGTCAGCATTGCTGAAATTCTCAACGAC
GAAATGAGCCATTGCAACAAAGATTTGGTTCATATAGTCTACAGTCTTTCAAAAGACATG
GGGTTACCAGGATTTAGAATTGGAATCGTATATTCTTTCAACGATGCCGTCGTTAATTGT
GCTAGAAAAATGTCGAGTTTCGGTCTAGTTTCTACTCAAACACAGCATTTGCTCGCTGAG
ATGTTGTCCGACGAAAAATTCGTCGCAAATTTTCTAGCTGAAAGCTCGAAGAGATTGGCG
AAAAGACACAAGCATTTCACTAACGGACTTGAAGAAGTTGGAATTAAATGCTTGAGAAGC
AATGCGGGACTCTTTTGTTGGATGGATTTGCGACCACTTTTGGAAGAGTCAACTTTCGAC
GCTGAAATGTCGTTATGGAGAGTGATTATAAATGATGTGAAGCTTAATGTCTCGCCTGGG
TCTTCATTTGATTGTCAAGAGCCAGGATTTTTCCGAGTTTGTTTCGCTAACATGGATGAT
GAAACTGTGGACATTGCGTTAGCGAGGATTCGGAGGTTTGTGGGTGTTAAGAAAAGTGGA
GATGAGTCGACGGCGATGGAGAAGAAGCAGCAATGGAAAAAGAGCAATCTACGACTTAGT
TTCTCGAAAAGAATGTTCGATGAAAGTGTTAATTTGTCACCACTTTCATCTCCTATTCCT
CATTCACCACTCGTTCGAGCTAGAACTTAA

Peptide Sequence

PEP ID

XP_016495987.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like [Nicotiana tabacum]
Sequence

MGFENEKNNSILSKLATNEEHGENSPYFDGWKAYDNDPFHPLKNPNGVIQMGLAENQLCF
DLIKEWIKRNPNASICTTEGIKSFRAIANFQDYHGLPEFRRAIAKFMEKTRGGRVTFDPE
RVVMAGGATGANETIIFCLADAGDAFLVPSPYYPAFNRDLRWRTGVQLIPIPCDSSNNFQ
ITTKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDRDTLKSLLTFTNQHNIHLVCDEI
YAATVFSTPQFVSIAEILNDEMSHCNKDLVHIVYSLSKDMGLPGFRIGIVYSFNDAVVNC
ARKMSSFGLVSTQTQHLLAEMLSDEKFVANFLAESSKRLAKRHKHFTNGLEEVGIKCLRS
NAGLFCWMDLRPLLEESTFDAEMSLWRVIINDVKLNVSPGSSFDCQEPGFFRVCFANMDD
ETVDIALARIRRFVGVKKSGDESTAMEKKQQWKKSNLRLSFSKRMFDESVNLSPLSSPIP
HSPLVRART

Transcript Sequence

Gene sequence data has not been registered.